Publication Archive

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2017

Addison, J. A., J. Barron, B. Finney, D. Bukry, L. Kusler, L. Heusser and C. R. Alexander.  2017. A Holocene record of ocean productivity and upwelling from the northern California continental slope. Quaternary International (pagination pending).  doi: 10.1016/j.quaint.2017.02.021
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Alexander, C. R., and H. L. Windom. 2017.  Material mobilization and transport in the Anadyr River-Estuarine System, eastern Siberia. Journal of Coastal Research 33(3): 548-563.  doi: 10.2112/JCOASTRES-D-16-00044.1    doi: 10.2112/JCOASTRES-D-16-00044.1
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Alexander, C. R., J. Y. S. Hodgson, and J. A. Brandes. 2017. Sedimentary processes and products in a mesotidal salt marsh environment: insights from Groves Creek, Georgia. Geo-Marine Letters 37(4): 345-359.  doi: 10.1007/s00367-017-0499-1
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Arnold, W. S., S. D. Meyers, S. P. Geiger, M. E. Luther, D. Narváez, M. E. Frischer, and E. Hofmann.  2017. Applying a coupled biophysical model to predict larval dispersal and source/sink relationships in a depleted metapopulation of the eastern oyster Crassostrea virginica.    Journal of Shellfish Research 36(1): 101-118.  doi: 10.2983/036.036.0112
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Barber, A., J. Brandes, A. Leri, K. Lalonde, K. Balind, S. Wirick, J. Wang, and Y. Gelinas. 2017. Preservation of organic matter in marine sediments by inner-sphere interactions with reactive iron. Scientific Reports 7: 366 (article number). doi:10.1038/s41598-017-00494-0
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Bray, M. S., J. Wu, B. C. Reed, C. B. Kretz, K. M. Belli, R. L. Simister, C. Henny, F. J. Stewart, T. J. DiChristina, J. A. Brandes, D. A. Fowle, S. A. Crowe, and J. B. Glass. 2017. Shifting microbial communities sustain multiyear iron reduction and methanogenesis in ferruginous sediment incubations. Geobiology (pagination pending). doi: 10.1111/gbi.12239
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Chang, D., W. C. Wu, C. R. Edwards, and F. M. Zhang.  2017.  Motion tomography: Mapping flow fields using autonomous underwater vehicles. International Journal of Robotics Research 36(3): 320-336.  doi: 10.1177/0278364917698747
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Dittmar, T., A. Stubbins, T. Ito, and D. C. Jones.  2017.  Comment on “Dissolved organic sulfur in the ocean: Biogeochemistry of a petagram inventory.” Science 356 (6340): 813.  doi: 10.1126/science.aam6039
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Fitzsimmons, J. N., S. G. John, C. M. Marsay, C. L. Hoffman, S. L. Nicholas, B. M. Toner, C. R. German, and R. M. Sherrell. 2017. Iron persistence in a distal hydrothermal plume supported by dissolved-particulate exchange.  Nature Geoscience 10(3): 195-201. doi: 10.1038/ngeo2900
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Giering, S. L. C., R. Sanders, A. P. Martin, S. A. Henson, J. S. Riley, C. M. Marsay, and D. G. Johns. 2017. Particle flux in the oceans: Challenging the steady-state assumption. Global Biogeochemical Cycles 31(1): 159-171. doi: 10.1002/2016GB005424
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Köster, M. and G. -A. Paffenhöfer, G.-A.  2017. How efficiently can doliolids (Tunicata, Thaliacea) utilize phytoplankton and their own fecal pellets? Journal of Plankton Research 39(2): 305-315.  doi: 10.1093/plankt/fbw089
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Poulin, B. A., J. N. Ryan, K. L. Nagy, A. Stubbins, T. Dittmar, W. Orem, D. P. Krabbenhoft, and G. R. Aiken. 2017. Spatial dependence of reduced sulfur in everglades dissolved organic matter controlled by sulfate enrichment. Environmental Science & Technology 51(7): 3630-3639 doi: 10.1021/acs.est.6b04142
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Powers, L. C., J. A. Brandes, A. Stubbins, and W. L. Miller. 2017. MoDIE: Moderate dissolved inorganic carbon (DI13C) isotope enrichment for improved evaluation of DIC photochemical production in natural waters. Marine Chemistry 194: 1-9.  doi: 10.1016/j.marchem.2017.03.007
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Powers, L. C., J. A. Brandes, W. L. Miller, and A. Stubbins.  2017. Using liquid chromatography‐isotope ratio mass spectrometry to measure the δ13C of dissolved inorganic carbon photochemically produced from dissolved organic carbon. Limnology and Oceanography: Methods 15(1): 103-115.  doi: 10.1002/lom3.10146
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Qu, B., M. Sillanpää, C. Li, S. Kang, A. Stubbins, F.Yan, K. S. Aho, F. Zhou, and P. A. Raymond. 2017. Aged dissolved organic carbon exported from rivers of the Tibetan Plateau. PLoS ONE 12(5): e0178166   doi: 10.1371/journal.pone.0178166
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Qu, B., M. Sillanpää, C. Li, S. Kang, A. Stubbins, F. Yan, K. S. Aho, F. Zhou, and P. A. Raymond. 2017. Correction: Aged dissolved organic carbon exported from rivers of the Tibetan Plateau. PLoS ONE 12(7): e0181295  doi: 10.1371/journal.pone.0181295
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Rossel, P. E., A. Stubbins, T. Rebling, A. Koschinsky, J. A. Hawkes, and T. Dittmar.  2017. Thermally altered marine dissolved organic matter in hydrothermal fluids.  Organic Geochemistry 110:73-86.  doi:  10.1016/j.orggeochem.2017.05.003
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Savidge, D. K., and A. E. Gargett. 2017.  Langmuir supercells on the middle shelf of the South Atlantic Bight: 1. Cell structure.   Journal of Marine Research 75(2):49-79.   doi: 10.1357/002224017821352641
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Stubbins, A, L. M. Silva, T. Dittmar, and J. T. Van Stan.  2017. Molecular and optical properties of tree-derived dissolved organic matter in throughfall and stemflow from live oaks and eastern red cedar. Frontiers in Earth Science 5:22. doi: 10.3389/feart.2017.00022
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Stubbins, A., P. J. Mann, L. Powers, T. B. Bittar, T. Dittmar, C. McIntyre, T. I. Eglinton, N. Zimov, and R. G. M. Spencer. 2017. Low photolability of yedoma permafrost dissolved organic carbon. Journal of Geophysical Research – Biogeosciences 122(1): 200-211. doi: 10.1002/2016JG003688
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Winder, M., J.-M. Bouquet, J. R. Bermúdez, S. A. Berger, T. Hansen, J. Brandes, A. F. Sazhin, J. C. Nejstgaard, U. Båmstedt, H. H. Jakobsen, J. Dutz, M. E. Frischer, C. Troedsson, and E. M. Thompson. 2017. Increased appendicularian zooplankton alter carbon cycling under warmer more acidified ocean conditions. Limnology and Oceanography 62(4): 1541-1551.  doi: 10.1002/lno.10516
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2016

Bittar, T. B., S. A. Berger, L. M. Birsa, T. L. Walters, M. E. Thompson, R. G. M. Spencer, E. L. Mann, A. Stubbins, M. E. Frischer, and J. A. Brandes. 2016. Seasonal dynamics of dissolved, particulate and microbial components of a tidal saltmarsh-dominated estuary under contrasting levels of freshwater discharge. Estuarine, Coastal and Shelf Science 182 (Part A): 72-85. doi: 10.1016/j.ecss.2016.08.046
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Cawley, K. M., A. E. Murray, P. T. Doran, F. Kenig, A. Stubbins, H. Chen, P. G. Hatcher, and D. M. McKnight. 2016. Characterization of dissolved organic material in the interstitial brine of Lake Vida, Antarctica. Geochimica et Cosmochimica Acta 183:63-78. doi: 10.1016/j.gca.2016.03.023
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Ceballos-Romero, E., F. A. C. Le Moigne, S. Henson, C. M. Marsay, R. Sanders, R. Garcia-Tenorio, and M. Villa-Alfageme. 2016. Influence of bloom dynamics on Particle Export Efficiency in the North Atlantic: a comparative study of radioanalytical techniques and sediment traps.  Marine Chemistry 186:198-210.  doi: 10.1016/j.marchem.2016.10.001
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Chambers, L. R., E. D. Ingall, E. M. Saad, A. F. Longo, M. Takeuchi, Y. Tang, C. Benitez-Nelson, S. T. Haley, S. T. Dyhrman, J. Brandes, and A. Stubbins. 2016. Enhanced dissolved organic matter recovery from saltwater samples with electrodialysis. Aquatic Geochemistry 22 (5-6, Special Issue): 555-572.  doi: 10.1007/s10498-016-9306-2
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Cho, S., F. M. Zhang, and C. R. Edwards.  2016.  Adaptive learning for controlled Lagrangian particle tracking.  2016 MTS/IEEE Oceans Conference, Monterey, CA. September 19-23, 2016.

Diaz, J. M., C. M. Hansel, A. Apprill, C. Brighi, T. Zhang, L. Weber, S. McNally, and L. P. Xun.  2016.  Species-specific control of external superoxide levels by the coral holobiont during a natural bleaching event.  Nature Communications 7 (13801).  doi: 10.1038/ncomms13801
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Diaz, J. M., K. M. Bjorkman, S. T. Haley, E. D. Ingall, D. M. Karl, A. F. Longo, and Dyhrman, S. T. 2016.  Polyphosphate dynamics at Station ALOHA, North Pacific subtropical gyre.  Limnology and Oceanography 61(1): 227-239.  doi:  10.1002/lno.10206
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Gargett, A. E., and D. K. Savidge.  2016.  Separation of short time series of currents into “fluctuations,” “tides,” and “mean” flow.  Journal of Atmospheric and Oceanic Technology 33(5): 1089-1095.  doi: 10.1175/JTECH-D-15-0232.1
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Hansel, C. M., C. Buchwald, J. M. Diaz, J. E. Ossolinski, S. T. Dyhrman, B. A. S. Van Mooy, and D. Polyviou. 2016. Dynamics of extracellular superoxide production by Trichodesmium colonies from the Sargasso Sea. Limnology and Oceanography 61(4): 1188-1200. doi: 10.1002/lno.10266
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Harvey, E. L., R. W. Deering, D. C. Rowley, A. El Gamal, M. Schorn, B. S. Moore, M. D. Johnson, T. J. Mincer, and K. E. Whalen. 2016. A bacterial quorum-sensing precursor induces mortality in the marine coccolithophore, Emiliania huxleyi. Frontiers in Microbiology 7:59. doi: 10.3389/fmicb.2016.00059
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Hawkes, A. D., A. C. Kemp, J. P. Donnelly, B. P. Horton, W. R. Peltier, N. Cahill, D. F. Hill, E. Ashe, and C. R. Alexander. 2016. Relative sea-level change in northeastern Florida (USA) during the last ~8.0 ka. Quaternary Science Reviews 142:90-101. doi: 10.1016/j.quascirev.2016.04.016
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Kaal, J., S. Wagner, and R. Jaffe.  2016.  Molecular properties of ultrafiltered dissolved organic matter and dissolved black carbon in headwater streams as determined by pyrolysis-GC-MS.  Journal of Analytical and Applied Pyrolysis 118:181-191.  doi: 10.1016/j.jaap.2016.02.003
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Kuehl, S. A., C. R. Alexander, N. E. Blair, C. K. Harris, K. M. Marsaglia, A. S. Ogston, A. R. Orpin, J. J. Roering, A. J. Bever, E. L. Bilderback, L. Carter, C. Cerovski-Darriau, L. B. Childress, D. R. Corbtt, R. P. Hale, E. L. Leithold, Litchfield, N., J. M. Moriarty, M. J. Page, L. E. R. Pierce, P. Upton, and J. P. Walsh. 2016. A source-to-sink perspective of the Waipaoa River margin.  Earth-Science Reviews 153: 301-334.  10.1016/j.earscirev.2015.10.001
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Leal, M. C., C. Ferrier-Pages, D. Petersen, and R. Osinga.  2016.  Coral aquaculture: applying scientific knowledge to ex situ production.  Reviews in Aquaculture 8(2): 136-153.  doi: 10.1111/raq.12087
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Moran, M. A., E. B. Kujawinski, A. Stubbins, R. Fatland, L. I. Aluwihare, A. Buchan, B. C. Crump, P. C. Dorrestein, S. T. Dyhrman, N. J. Hess, B. Howe, K. Longnecker, P. M. Medeiros, J. Niggemann, I. Obernosterer, D. J. Repeta, and J. R. Waldbauer. 2016. Deciphering ocean carbon in a changing world. Proceedings of the National Academy of Sciences of the United States of America 113(12): 3143-3151. doi:10.1073/pnas.1514645113
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Paffenhöfer, G. -A., and H. Jiang. 2016. On phytoplankton perception by calanoid copepods. Limnology and Oceanography 61(4): 1163-1168. doi: 10.1002/lno.10294
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Poulson-Ellestad, K. L., E. L. Harvey, M. D. Johnson, and T. Mincer. 2016. Evidence for strain-specific exometabolomic responses of the coccolithophore Emiliania huxleyi to grazing by the dinoflagellate Oxyrrhis marina. Frontiers in Marine Science 3:1. doi: 10.3389/fmars.2016.00001
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Pree, B., C. Kuhlisch, G. Pohnert, A. F. Sazhin, H. H. Jakobsen, M. L. Paulsen, M. Lund, M. E. Frischer, D. Stoecker, JC. Nejstgaard, and A. Larsen.  2016.  A simple adjustment to test reliability of bacterivory rates derived from the dilution method.  Limnology and Oceanography-Methods 14(2): 114-123.  doi: 10.1002/lom3.10076
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Ray, J. L., J. Althammer, K. S. Skaar, P. Simonelli, A. Larsen, D. Stoecker, A. Sazhin, U. Z. Ijaz, C. Quince, J. C. Nejstgaard, M. Frischer, G. Pohnert, and C. Troedsson.  2016.  Metabarcoding and metabolome analyses of copepod grazing reveal feeding preference and linkage to metabolite classes in dynamic microbial plankton communities.  Molecular Ecology 25(21): 5585-5602.  doi: 10.1111/mec.13844
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Rogan, N., E. P. Achterberg, F. A. C. Le Moigne, C. M. Marsay, A. Tagliabue, and R. G. Williams.  2016.  Volcanic ash as an oceanic iron source and sink.  Geophysical Research Letters 43(6): 2732-2740.  doi: 10.1002/2016GL067905
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Saad, E. M., A. F. Longo, L. R. Chambers, R. Huang, C. Benitez-Nelson, S. T. Dyhrman, J. M. Diaz, Y. Tang, and E. D. Ingall. 2016. Understanding marine dissolved organic matter production: Compositional insights from axenic cultures of Thalassiosira pseudonanaLimnology and Oceanography 61(6): 2222-2233.  doi: 10.1002/lno.10367
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Savidge, D. K. 2016. Comment on: Structure, transport, and vertical coherence of the Gulf Stream from the Straits of Florida to the Southeast Newfoundland Ridge, by Meinen and Luther. Deep-Sea Research Part I-Oceanographic Research Papers 112:155-157.   doi: 10.1016/j.dsr.2016.02.005
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Savidge, W. B., A. Wilson, and G. Woodward.  2016.  Using a thermal proxy to examine sediment-water exchange in mid-Continental Shelf sandy sediments. Aquatic Geochemistry 22(5-6) (Special Issue): 419-441.  doi: 10.1007/s10498-016-9295-1
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Savidge, W. B., J. Brink, and J. O. Blanton. 2016. Limited influence of urban stormwater runoff on salt marsh platform and marsh creek oxygen dynamics in coastal Georgia.  Environmental Management 58(6): 1074-1090.  doi:  10.1007/s00267-016-0761-8
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Schaffner, L. C., T. W. Hartley, and J. G. Sanders. 2016. Moving forward: 21st century pathways to strengthen the ocean science workforce through graduate education and professional development. Oceanography 29(1): 36-43.  doi: http://doi.org/10.5670/oceanog.2016.09
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Stubbins, A. 2016. A carbon for every nitrogen. Proceedings of the National Academy of Sciences of the United States of America 113(39): 10736-10738. doi: 10.1073/pnas.1612995113
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Wakeham, S. G., and E. A. Canuel. 2016. Biogenic polycyclic aromatic hydrocarbons in sediments of the San Joaquin River in California (USA), and current paradigms on their formation. Environmental Science and Pollution Research 23(11): 10426-10442. doi: 10.1007/s11356-015-5402-x
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Wakeham, S. G., and E. A. Canuel. 2016. The nature of organic carbon in density-fractionated sediments in the Sacramento-San Joaquin River Delta (California). Biogeosciences 13(2): 567-582. doi:10.5194/bg-13-567-2016
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Wilson, A. M., G. L. Woodward, and W. B. Savidge.  2016. Using heat as a tracer to estimate the depth of rapid porewater advection below the sediment-water interface.  Journal of Hydrology 538:743-753.  doi: 10.1016/j.jhydrol.2016.04.047
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Zhu, C., S. G. Wakeham, F. J. Elling, A. Basse, G. Mollenhauer, G. J. M. Versteegh, M. Konneke, and K. U. Hinrichs. 2016.  Stratification of archaeal membrane lipids in the ocean and implications for adaptation and chemotaxonomy of planktonic archaea.  Environmental Microbiology 18(12): 4324-4336.  doi: 10.1111/1462-2920.13289
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2015

Bittar, T. B., A. A. H. Vieira, A. Stubbins, and K. Mopper. 2015. Competition between photochemical and biological degradation of dissolved organic matter from the cyanobacteria Microcystis aeruginosaLimnology and Oceanography 60(4): 1172-1194. doi: 10.1002/lno.10090
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Bittar, T. B., A. Stubbins, A. A. H. Vieira, and K. Mopper. 2015. Characterization and photodegradation of dissolved organic matter (DOM) from a tropical lake and its dominant primary producer, the cyanobacteria Microcystis aeruginosaMarine Chemistry 177, Part 2: 205-217. doi: 10.1016/j.marchem.2015.06.016
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Breitbart, M., B. E. Benner, P. E. Jernigan, K. Rosario, L. M. Birsa, R. C. Harbeitner, S. Fulford, C. Graham, A. Walters, D. B. Goldsmith, S. A. Berger, J. C. Nejstgaard.  2015.  Discovery, prevalence, and persistence of novel circular single-stranded DNA viruses in the ctenophores Mnemiopsis leidyi and Beroe ovateFrontiers in Microbiology 6:1427.  doi: 10.3389/fmicb.2015.01427
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Buck, C. S., C. R. Hammerschmidt, K. L. Bowman, G. A. Gill, and W. M. Landing. 2015. Flux of total mercury and methylmercury to the northern Gulf of Mexico from U.S. estuaries. Environmental Science & Technology 49:13992-13999. doi: 10.1021/acs.est.5b03538
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Chang, D., F. M. Zhang, and C. R. Edwards. 2015. Real-time guidance of underwater gliders assisted by predictive ocean models.  Journal of Atmospheric and Oceanic Technology 32(3): 562-578.  doi: 10.1175/JTECH-D-14-00098.1
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Diaz, J. M., K. M. Bjorkman, S. T. Haley, E. D. Ingall, D. M. Karl, A. F. Longo, and S. T. Dyhrman. 2015. Polyphosphate dynamics at Station ALOHA, North Pacific subtropical gyre. Limnology and Oceanography 61(1): 227-239. doi: 10.1002/lno.10206
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Dupont, C. L., J. P. McCrow, R. Valas, A. Moustafa, N. Walworth, U. Goodenough, R. Roth, S. L. Hogle, J. Bai, Z. I. Johnson, E. Mann, B. Palenik, K. A. Barbeau, J. C. Venter, and A. E. Allen. 2015.  Genomes and gene expression across light and productivity gradients in eastern subtropical Pacific microbial communities.  ISME Journal 9(5): 1076-1092.  doi: 10.1038/ismej.2014.198
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Fellman, J. B., E. Hood, P. A. Raymond, A. Stubbins, and R. G. M. Spencer. 2015. Spatial variation in the origin of dissolved organic carbon in snow on the Juneau Icefield, Southeast Alaska. Environmental Science & Technology 49(19): 11492-11499. doi: 10.1021/acs.est.5b02685
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French, D. W., C. Huguet, C. Turich, S. G. Wakeham, L. T. Carlson, and A. E. Ingalls. 2015. Spatial distributions of core and intact glycerol dialkyl glycerol tetraethers (GDGTs) in the Columbia River basin and Willapa Bay, Washington: Insights into origin and implications for the BIT index. Organic Geochemistry 88:91-112. doi: 10.1016/j.orggeochem.2015.09.001
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Gambill, J. M., A. E. Doyle, R. F. Lee, P. J. Geer, A. N. Walker, L. G. Parker, and M. E. Frischer.  2015.  The mystery of black gill: shrimpers in the South Atlantic face off with a cryptic parasite. Current: The Journal of Marine Education 29: 2-8
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Gong, Y., R. He, G. G. Gawarkiewicz, and D. K. Savidge. 2015. Numerical investigation of coastal circulation dynamics near Cape Hatteras, North Carolina, in January 2005. Ocean Dynamics 65(1): 1-15. doi: 10.1007/s10236-014-0778-6
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Grand, M. M., C. I. Measures, M. Hatta, W. T. Hiscock, C. S. Buck, and W. M. Landing. 2015. Dust deposition in the eastern Indian Ocean: The ocean perspective from Antarctica to the Bay of Bengal. Global Biogeochemical Cycles 29(3): 357-374. doi: 10.1002/2014GB004898
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Grand, M. M., C. I. Measures, M. Hatta, W. T. Hiscock, W. M. Landing, P. L. Morton, C. S. Buck, P. M. Barett, and J. A. Resing. 2015. Dissolved Fe and Al in the upper 1000m of the eastern Indian Ocean: A high-resolution transect along 95°E from the Antarctic margin to the Bay of Bengal. Global Biogeochemical Cycles 29(3): 375-396. doi: 10.1002/2014GB004920
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Gwiazda, R., C. K. Paull, W. Ussler III, and C. R. Alexander. 2015. Evidence of modern fine-grained sediment accumulation in the Monterey Fan from measurements of the pesticide DDT and its metabolites. Marine Geology 363:125-133. doi: 10.1016/j.margeo.2015.02.006
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Hammerstein, H. C., P. A. Work, and M. E. Frischer.  2015.  Bacteriophage tracer for fecal contamination sources in coastal waters.  Water Quality Exposure and Health 7(1): 15-26.  doi: 10.1007/s12403-013-0104-4
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Harvey, E. L., K. D. Bidle, and M. D. Johnson. 2015. Consequences of strain variability and calcification in Emiliania huxleyi on microzooplankton grazing. Journal of Plankton Research 37(6): 1137-1148. doi: 10.1093/plankt/fbv081
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Harvey, E., S. Menden-Deuer, and T. A. Rynearson. 2015. Persistent intra-specific variation in genetic and behavioral traits in the raphidophyte, Heterosigma akashiwoFrontiers in Microbiology 6:1277. doi: 10.3389/fmicb.2015.01277
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Hauer, M. E., J. M. Evans, and C. R. Alexander. 2015. Sea-level rise and sub-county population projections in coastal Georgia. Population and Environment 37(1): 44-62. doi: 10.1007/s11111-015-0233-8
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Hawkes, J. A., P. E. Rossel, A. Stubbins, D. Butterfield, D. P. Connelly, E. P. Achterberg, A. Koschinsky, V. Chavagnac, C. T. Hansen, W. Bach, and T. Dittmar. 2015. Efficient removal of recalcitrant deep-ocean dissolved organic matter during hydrothermal circulation. Nature Geoscience 8:856-860. doi: 10.1038/ngeo2543
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Helms, J. R., J. Mao, H. Chen, E. M. Perdue, N. W. Green, P. G. Hatcher, K. Mopper, and A. Stubbins. 2015. Spectroscopic characterization of oceanic dissolved organic matter isolated by reverse osmosis coupled with electrodialysis. Marine Chemistry 177, Part 2: 278-287. doi: 10.1016/j.marchem.2015.07.007
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Huang, W. -J., W. -J. Cai, Y. Wang, X. Hu, B. Chen, S. E. Lohrenz, S. Chakraborty, R. He, J. Brandes, and C. S. Hopkinson. 2015. The response of inorganic carbon distributions and dynamics to upwelling-favorable winds on the northern Gulf of Mexico during summer. Continental Shelf Research 111:211-222.  doi: 10.1016/j.csr.2015.08.020
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Hunter, E. A., N. P. Nibbelink, C. R. Alexander, K. Barrett, L. F. Mengak, R. K. Guy, C. T. Moore, and R. J. Cooper. 2015. Coastal vertebrate exposure to predicted habitat changes due to sea level rise. Environmental Management 56(6): 1528-1537. doi: 10.1007/s00267-015-0580-3
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Kopf, A., M. Bicak, R. Kottmann, J. Schnetzer, I. Kostadinov, K. Lehmann, A. Fernandez-Guerra, C. Jeanthon, E. Rahav, M. Ullrich, A. Wichels, G. Gerdts, P. Polymenakou, G. Kotoulas, R. Siam, R. Z. Abdallah, E. C. Sonnenschein, T. Cariou, F. O’Gara, S. Jackson, S. Orlic, M. Steinke, J. Busch, B. Duarte,I. Cacador, J. Canning-Clode, O. Bobrova, V. Marteinsson, E. Reynisson, C. M. Loureiro, G. M. Luna, G. M. Quero, C. R. Loscher, A. Kremp, M. E. DeLorenzo, L. Ovreas, J. Tolman, J. LaRoche, A. Penna, M. Frischer, T. Davis, B. Katherine, C. P. Meyer, S. Ramos, C. Magalhaes, F. Jude-Lemeilleur, M. L. Aguirre-Macedo, S. Wang, N. Poulton, S. Jones, R. Collin, J. A. Fuhrman, P. Conan, C. Alonso, N. Stambler, K. Goodwin, M. M. Yakimov, F. Baltar, L. Bodrossy, J. Van De Kamp, D. M. Frampton, M. Ostrowski, P. Van Ruth, P. Malthouse, S. Claus, K. Deneudt, J. Mortelmans, S. Pitois, D. Wallom, I. Salter, R. Costa, D. C. Schroeder, M. M. Kandil, V. Amaral, F. Biancalana, R. Santana, M. L. Pedrotti, T. Yoshida, H. Ogata, T. Ingleton, K. Munnik, N. Rodriguez-Ezpeleta, V. Berteaux-Lecellier, P. Wecker, I. Cancio, D. Vaulot, C. Bienhold, H. Ghazal, B. Chaouni, S. Essayeh, S. Ettamimi, E. H. Zaid, N. Boukhatem, A. Bouali, R. Chahboune, S. Barrijal, M. Timinouni, F. El Otmani, M. Bennani, M. Mea, N. Todorova, V. Karamfilov, P. Ten Hoopen, G. Cochrane, S. L’Haridon, K. C. Bizsel, A. Vezzi, F. M. Lauro, P. Martin, R. M. Jensen, J. Hinks, S. Gebbels, R. Rosselli, F. De Pascale, R. Schiavon, A. Dos Santos, E. Villar, S. Pesant, B. Cataletto, F. Malfatti, R. Edirisinghe, J. A. H. Silveira, M. Barbier, V. Turk, T. Tina, W. J. Fuller, I. Salihoglu, N. Serakinci, M. C. Ergoren, E. Bresnan, J. Iriberri, P. A. F. Nyhus, E. Bente, H. E. Karlsen, P. N. Golyshin, J. M. Gasol, S. Moncheva, N. Dzhembekova, Z. Johnson, C. D. Sinigalliano, M. L. Gidley, A. Zingone, R. Danovaro, G. Tsiamis, M. S. Clark, A. C. Costa, M. El Bour, A. M. Martins, R. E. Collins, A.-L. Ducluzeau, J. Martinez, M. J. Costello, L. A. Amaral-Zettler, J. A. Gilbert, N. Davies, D. Field, and F. O. Glockner.  2015.  The ocean sampling day consortium. GigaScience 4:27-27.  doi: 10.1186/s13742-015-0066-5
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Kuehl, S. A., C. R. Alexander, N. E. Blair, C. K. Harris, K. M. Marsaglia, A. S. Ogston, A. R. Orpin, J. J. Roering, A. J. Bever, E. L. Bilderback, L. Carter, C. Cerovski-Darriau, L. B. Childress, D. R. Corbett, R. P. Hale, E. L. Leithold, N. Litchfield, J. M. Moriarty, M. J. Page, L. E. R. Pierce, P. Upton, and J. P. Walsh. 2015. A source to sink perspective of the Waipaoa River margin. Earth-Science Reviews 153:301-334. doi: 10.1016/j.earscirev.2015.10.001
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Leal, M. C., and R. Calado.  2015.  Marine natural products:  Biodiscovery, biodiversity, and bioproduction.  In  Bioactive Natural Products: Chemistry and Biology, ed. Goutam Brahmachari, 473-490.  John Wiley & Sons, Incorporated.

Leal, M. C., B. Jesus, J. Ezequiel, R. Calado, R. J. M. Rocha, P. Cartaxana, and J. Serodio.  2015. Concurrent imaging of chlorophyll fluorescence, Chlorophyll a content and green fluorescent proteins-like proteins of symbiotic cnidarians.  Marine Ecology—An Evolutionary Perspective 36(3): 572-584.  doi: 10.1111/maec.12164
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Lee, R. F., and D. P. Sanders.  2015.  The amount and accumulation rate of plastic debris on marshes and beaches on the Georgia coast.  Marine Pollution Bulletin 91(1): 113-119.  doi: 10.1016/j.marpolbul.2014.12.019
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Logvinova, C. L., K. E. Frey, P. J. Mann, A. Stubbins, and R. G. M. Spencer. 2015. Assessing the potential impacts of declining arctic sea ice cover on the photochemical degradation of dissolved organic matter in the Chukchi and Beaufort seas. Journal of Geophysical Research: Biogeosciences 120(11): 2326-2344. doi: 10.1002/2015jg003052
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Marsico, R. M., R. J. Schneider, B. M. Voelker, T. Zhang, J. M. Diaz, C. M. Hansel, and S. Ushijima. 2015. Spatial and temporal variability of widespread dark production and decay of hydrogen peroxide in freshwater. Aquatic Sciences 77(4): 523-533. doi: 10.1007/s00027-015-0399-2
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Mopper, K., D. Kieber, and A. Stubbins. 2015. Marine photochemistry of organic matter: processes and impacts. In Biogeochemistry of Marine Dissolved Organic Matter (Second Edition), ed. Dennis A. Hansell, and Craig A. Carlson, 389-450. Academic Press, Burlingtondoi: 10.1016/B978-0-12-405940-5.00008-X
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Niencheski, L. F. H., and H. L. Windom.  2015.  Chemistry of a surficial aquifer of a large coastal lagoon barrier and its relation to adjacent surface waters of Brazil.  Journal of Coastal Research 31(6): 1417-1428.  doi: 10.2112/JCOASTRES-D-13-00175.1
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Quintana, C. O., de Moraes, P. C., Yoshinaga, M. Y., Wakeham, S. G. and Sumida, P. Y. G. 2015. Microbial biomass response to different quantities and sources of organic matter in Brazilian coastal sediments. Marine Ecology 36:766–779. doi: 10.1111/maec.12182
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Rachal, D. M., G. S. Okin, C. R. Alexander, J. E. Herrick, and D. P. C. Peters. 2015. Modifying landscape connectivity by reducing wind driven sediment redistribution, Northern Chihuahuan Desert, USA. Aeolian Research 17:129-137. doi: 10.1016/j.aeolia.2015.03.003
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Repeta, D. J., L. Aluwihare, C. Carlson, Z. Liu, C. Nelson, and A. Stubbins. 2015. Introduction to the special issue on the Biogeochemistry of Dissolved Organic Matter. Marine Chemistry 177, Part 2: 203-204. doi: 10.1016/j.marchem.2015.10.002
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Rocha, R. J. M., B. Bontas, P. Cartaxana, M. C. Leal, J. M. Ferreira, R. Rosa, J. Serodio, and R. Calado.  2015.  Development of a standardized modular system for experimental coral culture.  Journal of the World Aquaculture Society 46(3): 235-251.  doi: 10.1111/jwas.12186
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Rossel, P. E., A. Stubbins, P. F. Hach, and T. Dittmar. 2015. Bioavailability and molecular composition of dissolved organic matter from a diffuse hydrothermal system. Marine Chemistry 177, Part 2: 257-266. doi: 10.1016/j.marchem.2015.07.002
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Scharler, U. M., R. E. Ulanowicz, M. Fogel, M. Wooller, M. Jacobson-Meyers, C. Lovelock, I. Feller, M. Frischer, R. Lee, K. McKee, S. Joye, J. Schmit, C. Shearer, and I. Romero. 2015. Variable nutrient stoichiometry (C:N:P) across trophic levels determines extent of nutrient limitations, transfer efficiencies and recycling in a mangrove ecosystem, Belize. Oecologia 179:863-876. doi: 10.1007/s00442-015-3379-2
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Spencer, R. G. M., P. J. Mann, T. Dittmar, T. I. Eglinton, C. McIntyre, R. M. Holmes, N. Zimov, and A. Stubbins. 2015. Detecting the signature of permafrost thaw in Arctic rivers. Geophysical Research Letters 42(8): 2830-2835. doi: 10.1002/2015GL063498
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Stubbins, A., and T. Dittmar. 2015. Illuminating the deep: Molecular signatures of photochemical alteration of dissolved organic matter from North Atlantic Deep Water. Marine Chemistry 177, Part 2: 318-324. doi: 10.1016/j.marchem.2015.06.020
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Stubbins, A., R. Spencer, P. J. Mann, R. M. Holmes, J. McClelland, J. Niggemann, and T. Dittmar. 2015. Utilizing colored dissolved organic matter to derive dissolved black carbon export by Arctic rivers. Frontiers in Earth Science 3:63. doi: 10.3389/feart.2015.00063
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Sullivan, J. C., R. Torres, A. Garrett, J. Blanton, C. Alexander, M. Robinson, T. Moore, J. Amft, and D. Hayes.  2015.  Complexity in salt marsh circulation for a semienclosed basin.  Journal of Geophysical Research – Earth Surface 120(10): 1973-1989.  doi: 10.1002/2014JF003365
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Tait, Z. S., M. Thompson, and A. Stubbins. 2015. Chemical fouling reduction of a submersible steel spectrophotometer in estuarine environments using a sacrificial zinc anode. Journal of Environmental Quality 44(4): 1321-1325. doi: 10.2134/jeq2014.11.0484
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Van Stan, J. T., II, A. Stubbins, T. Bittar, J. S. Reichard, K. A. Wright, and R. B. Jenkins.  2015.  Tillandsia usneoides (L.) L. (Spanish moss) water storage and leachate characteristics from two maritime oak forest settings. Ecohydrology 8(6): 988-1004.  doi:  10.1002/eco.1549
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Wagner, S., R. Jaffe, K. Cawley, T. Dittmar, and A. Stubbins. 2015. Associations between the molecular and optical properties of dissolved organic matter in the Florida Everglades, a model coastal wetland system. Frontiers in Chemistry 3: 66. doi: 10.3389/fchem.2015.00066
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2014

Barrett, P. M., J. A. Resing, N. J. Buck, R. A. Feely, J. L. Bullister, C. S. Buck, and W. M. Landing. 2014. Calcium carbonate dissolution in the upper 1000m of the eastern North Atlantic. Global Biogeochemical Cycles 28(4): 386-397. doi: 10.1002/2013GB004619
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Berger, S. A., S. Diehl, H. Stibor, P. Sebastian, and A. Scherz. 2014. Separating effects of climatic drivers and biotic feedbacks on seasonal plankton dynamics: no sign of trophic mismatch. Freshwater Biology 59:2204-2220. doi: 10.1111/fwb.12424
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Calbet, A., A. F. Sazhin, J. C. Nejstgaard, S. A. Berger, Z. S. Tait, L. Olmos, D. Sousoni, S. Isari, R. A. Martínez, J. -M. Bouquet, E. M. Thompson, U. Båmstedt, and H. H. Jakobsen. 2014. Future climate scenarios for a coastal productive planktonic food web resulting in microplankton phenology changes and decreased trophic transfer efficiency. PLoS ONE 9(4): e94388. doi: 10.1371/journal.pone.0094388
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Cass, C. J., K. L. Daly, and S. G. Wakeham. Assessment of storage lipid accumulation patterns in eucalanoid copepods from the eastern tropical Pacific Ocean. 2014. Deep-Sea Research Part 1 Oceanographic Research Papers 93:117-130. doi: 10.1016/j.dsr.2014.08.001
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Chen, H., A. Stubbins, E. M. Perdue, N. W. Green, J. R. Helms, K. Mopper, and P. G. Hatcher. 2014. Ultrahigh resolution mass spectrometric differentiation of dissolved organic matter isolated by coupled reverse osmosis-electrodialysis from various major oceanic water masses. Marine Chemistry 164:48-59. doi: 10.1016/j.marchem.2014.06.002
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Close, H. G., S. G. Wakeham, and A. Pearson. 2014. Lipid and 13C signatures of submicron and suspended particulate organic matter in the Eastern Tropical North Pacific: Implications for the contribution of Bacteria. Deep-Sea Research I 85:15-35. doi: 10.1016/j.dsr.2013.11.005
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Dittmar, T., and A. Stubbins. 2014. Dissolved organic matter in aquatic systems. In Treatise on geochemistry, ed. H. D. Holland, and K. K. Turekian, 25-156. Oxford: Elsevier. doi: 10.1016/B978-0-08-095975-7.01010-X
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Fellman, J. B., Hood, E., R. G. M. Spencer, A. Stubbins, and P. A. Raymond. 2014. Watershed glacier coverage influences dissolved organic matter biogeochemistry in coastal watersheds of southeast Alaska. Ecosystems 17(6): 1014-1025. doi: 10.1007/s10021-014-9777-1
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Frischer, M. E., C. A. Sanchez, T. L. Walters, M. E. Thompson, L. M. Frazier, and G.-A. Paffenhöfer. 2014. Reliability of qPCR for quantitative gut content estimation in the circumglobally abundant pelagic tunicate Dolioletta gegenbauri (Tunicata, Thaliacea). Food Webs 1:18-24. doi: 10.1016/j.fooweb.2014.11.001
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Gargett, A. E., D. K. Savidge, and J. R. Wells. 2014. Anatomy of a Langmuir supercell event. Journal of Marine Research 72(3): 127-163. doi: 10.1357/002224014814901976
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Grand, M. M., C. S. Buck, W. M. Landing, C. I. Measures, M. Hatta, W. T. Hiscock, M.Brown, and J. A. Resing. 2014. Quantifying the impact of atmospheric deposition on the biogeochemistry of Fe and Al in the upper ocean: A decade of collaboration with the USCLIVAR-CO2 Repeat Hydrography Program. Oceanography 27(1): 62-65. doi: 10.5670/oceanog.2014.08
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Green, N. W., E. M. Perdue, G. R. Aiken, K. D. Butler, H. Chen, T. Dittmar, J. Niggemann, and A. Stubbins. 2014. An intercomparison of three methods for the large-scale isolation of oceanic dissolved organic matter. Marine Chemistry 161:14-19. doi: 10.1016/j.marchem.2014.01.012
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Hammerstein, H. C., P. A. Work, and M. E. Frischer. 2014. Bacteriophage tracer for fecal contamination sources in coastal waters. Water Quality, Exposure and Health 7(1): 15-26. doi: 10.1007/s12403-013-0104-4
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Helms, J. R., J. Mao, A. Stubbins, K. Schmidt-Roh, R. G. M. Spencer, P. J. Hernes, and K. Mopper. 2014. Loss of optical and molecular indicators of terrigenous dissolved organic matter during long-term photobleaching. Aquatic Sciences 76(3): 353-373. doi: 10.1007/s00027-014-0340-0
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Köster, M., G.-A. Paffenhöfer, R. Schlüter, and A. Meuche. 2014. Time-series observations of prokaryotic colonization of zooplankton fecal pellets. Journal of Plankton Research 36(6): 1461-1475. doi: 10.1093/plankt/fbu060
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Leal, M. C., C. Ferrier-Pagès, R. Calado, J. A. Brandes, M. E. Frischer, and J. C. Nejstgaard. 2014. Trophic ecology of the facultative symbiotic coral Oculina arbusculaMarine Ecology Progress Series 504:171-179. doi: 10.3354/meps10750
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Leal, M. C., C. Ferrier-Pagès, R. Calado, M. E. Thompson, M. E. Frischer, and J. C. Nejstgaard. 2014. Coral feeding on microalgae assessed with molecular trophic markers. Molecular Ecology 23(15): 3870-3876. doi: 10.1111/mec.12486
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Leal, M. C., J. C. Nejstgaard, R. Calado, M. E. Thompson, and M. E. Frischer. 2014. Molecular assessment of heterotrophy and prey digestion in zooxanthellate cnidarians. Molecular Ecology (Special Issue: Molecular Detection of Trophic Interactions) 23:3838-3848. doi: 10.1111/mec.12496
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Leal, M. C., S. A. Berger, C. Ferrier-Pagès, R. Calado, J. Brandes, M. E. Frischer, and J. C. Nejstgaard. 2014. Temporal changes in the trophic ecology of the asymbiotic gorgonian Leptogorgia virgulataMarine Biology 161(9): 2191-2197. doi: 10.1007/s00227-014-2496-5
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Liu, X. –L. C. Zhu, S. G. Wakeham, and K. -U. Hinrichs. 2014. In situ production of branched glycerol dialkyl tetraethers in anoxic marine water columns. Marine Chemistry 166:1-8. doi: 10.1016/j.marchem.2014.08.008
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Longo, A. F., E. D. Ingall, J. M. Diaz, M. Oakes, L. E. King, A. Nenes, N. Mihalopoulos, K. Violaki, A. Avila, C. R. Benitez-Nelson, J. Brandes, I. McNulty, and D. J. Vine. 2014. P-NEXFS analysis of aerosol phosphorus delivered to the Mediterranean Sea, Geophysical Research Letters 41:4043-4049. doi: 10.1002/2014GL060555
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Savidge, D. K., and W. B. Savidge. 2014. Seasonal export of South Atlantic Bight and Mid-Atlantic Bight shelf waters at Cape Hatteras. Continental Shelf Research 74:50-59. doi: 10.1016/j.csr.2013.12.008
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Spencer, R. G. M., A. Vermilyea, J. Fellman, P. Raymond, A. Stubbins, D. Scott, and E. Hood. 2014. Seasonal variability of organic matter composition in an Alaskan glacier outflow: insights into glacier carbon sources. Environmental Research Letters 9(5): 055005. doi: 10.1088/1748-9326/9/5/055005
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Spencer, R. G. M., G. Weidong, P. Raymond, T. Dittmar, E. Hood, J. Fellman, and A. Stubbins. 2014. Source and biolability of ancient dissolved organic matter in glacier and lake ecosystems on the Tibetan Plateau. Geochimica et Cosmochimica Acta 142:64-74. doi: 10.1016/j.gca.2014.08.006
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Stubbins, A., J. -F. Lapierre, M. Berggren, Y. Prairie, T. Dittmar, and P. del Giorgio. 2014. What’s in an EEM? Molecular signatures associated with dissolved organic fluorescence in boreal Canada. Environmental Science and Technology 8(18): 10598-10606. doi: 10.1021/es502086e
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Van Alstyne, K. L., E. L. Harvey, and M. Cataldo. 2014. Effects of dopamine, a compound released by the green-tide macroalga Ulvaria obscura (Chlorophyta), on marine algae and invertebrate larvae and juveniles. Phycologia 53(2): 195-202. doi: 10.2216/13-237.1
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Van Stan, J. T., A. Stubbins, T. Bittar, J. S. Reichard, K. A. Wright, and R. B. Jenkins. 2014. Tillandsia usneoides (L.) L. (Spanish moss) water storage and leachate characteristics from two maritime oak forest settings. Ecohydrology 8(6): 988-1004. doi: 10.1002/eco.1549
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Wakeham, S. G., and A. P. McNichol. 2014. Transfer of organic carbon through marine water columns to sediments – insights from stable and radiocarbon isotopes of lipid biomarkers. Biogeosciences 11(23): 6895-6914. doi: 10.5194/bg-11-6895-2014
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Williams, R. L., R. McKinney, S. Wakeham, and K. F. Wishner. 2014. Trophic ecology and vertical trends of carbon and nitrogen isotopes in oxygen minimum zone zooplankton. Deep-Sea Research I 90:36-47. doi: 10.1016/j.dsr.2014.04.008
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Wolfram, S., J. C. Nejstgaard, and G. Pohnert. 2014. Accumulation of polyunsaturated aldehydes in the gonads of the copepod Acartia tonsa revealed by tailored fluorescent probes. PLOS ONE 9(11): e112522. doi: 10.1371/journal.pone.0112522
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Xie, S., X. -L. Liu, F. Schubotz, S. G. Wakeham, and K. -U. Hinrichs. 2014. Distribution of glycerol ether lipids in the oxygen minimum zone of the Eastern Tropical North Pacific Ocean. Organic Geochemistry 71:60-71. doi: 10.1016/j.orggeochem.2014.04.006
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2013

Buck, C. S., W. M. Landing, and J. Resing. 2013. Pacific Ocean aerosols: Deposition and solubility of iron, aluminum, and other trace elements. Marine Chemistry 157:117-130. doi: 10.1016/j.marchem.2013.09.005
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Carr, S. A., S. W. Vogel, R. B. Dunbar, J. Brandes, C. T. Mills, J. R. Spear, R. Levy, T. R. Naish, R. D. Powell, S. G. Wakeham, and K. W. Mandernack. 2013. Bacterial abundance and composition in marine sediments beneath the Ross Ice Sheet, Antarctica. Geobiology 11:377-395. doi: 10.1111/gbi.12042
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Christensen, B. A., C. R. Alexander, J. A. Goff, R. J. Turner, and J. A. Austin, Jr. 2013. The Last Glacial: Insights from continuous coring on the New Jersey continental shelf. Marine Geology 335:78-99. doi: 10.1016/j.margeo.2012.10.015
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Diaz, J. M., C. M. Hansel, B. M. Voelker, C. M. Mendes, P. F. Andeer, and T. Zhang. 2013. Widespread production of extracellular superoxide by heterotrophic bacteria. Science 340:1223. doi: 10.1126/science.1237331
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Gerecht, A., Y. Carotenuto, A. Ianora, G. Romano, A. Fontana, G. d’Ippolito, H. H. Jakobsen, and J. C. Nejstgaard. 2013. Oxylipin production during a mesocosm bloom of Skeletonema marinoiJournal of Experimental Marine Biology and Ecology 446:159-165. doi: 10.1016/j.jembe.2013.05.014
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Harvey, E. L., H. J. Jeong, and S. Menden-Deuer. 2013. Avoidance and attraction: Chemical cues influence predator-prey interactions of planktonic protists. Limnology & Oceanography 58(4): 1176-1184. doi: 10.4319/lo.2013.58.4.1176
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Helms, J. R., A. Stubbins, E. M. Perdue, N. W. Green, H. Chen, and K. Mopper. 2013. Photochemical bleaching of oceanic dissolved organic matter and its effect on absorption spectral slope and fluorescence. Marine Chemistry 155:81-91. doi: 10.1016/j.marchem.2013.05.015
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Ingall, E. D., J. M. Diaz (co-first author), A. Longo, J. A. Brandes, L. A. Finney, M. Oakes, S. Vogt, B. Lai, and P. L. Yager. 2013. Role of biogenic silica in the removal of iron from the Antarctic seas. Nature Communications 4:1981. doi: 10.1038/ncomms2981
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Jaffé, R., Y. Ding, J. Niggemann, A. V. Vähätalo, A. Stubbins, R. G. M. Spencer, J. Campbell, and T. Dittmar. 2013. Global charcoal mobilization from soils via dissolution and riverine transport to the oceans. Science 340 (6130): 345-347. doi: 10.1126/science.1231476
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Köster, M., and G.-A. Paffenhöfer. 2013. Oxygen consumption of fecal pellets of doliolids (Tunicata, Thaliacea) and planktonic copepods (Crustacea, Copepoda). Journal of Plankton Research 35(2): 323-336. doi: 10.1093/plankt/fbs092
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Leal, M. C., C. R. B. Mendes, V. M. Tavano, M. S. de Souza, V. Brotas, and C. A. E. Garcia. 2013. Shifts in the dominance between diatoms and cryptophytes during three late summers in the Bransfield Strait (Antarctic Peninsula). Polar Biology 36:537-547. doi: 10.1007/s00300-012-1282-4
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Leal, M. C., C. Sheridan, E. Kramarsky-Winter, M. Sweet, and A. Kushmaro. 2013. Diseases in coral aquaculture: causes, implications and preventions. Aquaculture 396-399:124-135. doi: 10.1016/j.aquaculture.2013.02.037
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Leal, M. C., P. N. Pochelon, T. L. da Silva, A. Reis, R. Rosa, and R. Calado. 2013. Variable within-brood maternal provisioning in newly extruded embryos of Homarus gammarusMarine Biology 160:763-772. doi: 10.1007/s00227-012-2131-2.
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Morton, P. L., W. M. Landing, S.-C. Hsu, A. Milne, A. M. Aguilar-Islas, A. R. Baker, A. R. Bowie, C. S. Buck, Y. Gao, S. Gichuki, M. G. Hastings, M. Hatta, A. M. Johansen, R. Losno, C. Mead, M. D. Patey, G. Swarr, A. Vandermark, and L. M. Zamora. 2013. Methods for the sampling and analysis of marine aerosols: results from the 2008 GEOTRACES aerosol intercalibration experiment. Limnology and Oceanography: Methods 11:62-78. doi:10.4319/lom.2013.11.62
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Osburn, C. L., C. A. Stedmon, R. G. M. Spencer, and A. Stubbins. 2013. Emerging Issues Workshop Report: Linking optical and chemical properties of dissolved organic matter in natural waters. Limnology and Oceanography Bulletin 22:78-82. doi: 10.1002/lob.201322369
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Paffenhöfer, G.-A. 2013. A hypothesis on the fate of blooms of doliolids (Tunicata, Thaliacea). Journal of Plankton Research 35(4): 919-924. doi: 10.1093/plankt/fbt048
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Rocha, R. J. M., J. Serôdio, M. C. Leal, P. Cartaxana, and R. Calado. 2013. Effect of light intensity on post-fragmentation photobiological performance of the soft coral Sinularia flexibilisAquaculture 388-391:24-29. doi: 10.1016/j.aquaculture.2013.01.013
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Rontani, J. -F., J. K. Volkman, F. G. Prahl, and S. G. Wakeham. 2013. Biotic and abiotic degradation of alkenones and implications for paleoproxy applications: A review. Organic Geochemistry 59:95-113. doi: 10.1016/j.orggeochem.2013.04.005
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Savidge, D. K., J. A. Austin, and B. O. Blanton. 2013. Variation in the Hatteras Front density and velocity structure Part 1: High resolution transects from three seasons in 2004-2005. Continental Shelf Research 54:93-105. doi: 10.1016/j.csr.2012.11.005
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Savidge, D. K., J. A. Austin, and B. O. Blanton. 2013. Variation in the Hatteras Front density and velocity structure Part 2: Historical setting. Continental Shelf Research 54:106-116. doi: 10.1016/j.csr.2012.11.006
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Shah, S. R., S. B. Joye, J. A. Brandes, and A. P. McNichol. 2013. Carbon isotopic evidence for microbial control of carbon supply to Orca Basin at the seawater–brine interface. Biogeosciences 10:3175-3183. doi: 10.5194/bg-10-3175-2013
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Spencer, R. G. M., A. Stubbins, and J. Gaillardet. 2013. Geochemistry of the Congo River, estuary and plume. In Biogeochemical Dynamics at Major River-Coastal Interfaces: Linkages with Global Change, ed. T. S. Bianchi, M. A. Allison, and W.-J. Cai, 554-583. Cambridge: Cambridge University Press.
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Spencer, R. G .M., G. R. Aiken, M. M. Dornblaser, K. D. Butler, R. M. Holmes, G. Fiske, P. J. Mann, and A. Stubbins. 2013. Chromophoric dissolved organic matter export from U.S. rivers. Geophysical Research Letters 40:1575-1579. doi: 10.1002/grl.50357
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Strom, S. L., E. L. Harvey, K. A. Fredrickson, and S. Menden-Deuer. 2013. Broad salinity tolerance as a refuge from predation in the harmful raphidophyte alga, Heterosigma akashiwo (Raphidophyceae). Journal of Phycology 49:20-31. doi: 10.1111/jpy.12013
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Troedsson, C., J. M. Bouquet, C. Lobon, A. Novac, J. C. Nejstgaard, S. Dupont, S. Bosak, H. H. Jakobsen, N. Romanova, L. Pankoke, A. Isla, J. Dutz, A. F. Sazhin, and E. M. Thompson. 2013. Effects of ocean acidification, temperature and nutrient regimes on the appendicularian Oikopleura dioica: A mesocosm study. Marine Biology 160(8): 2175-2187. doi: 10.1007/s00227-012-2137-9
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Turck, J. A., and C. R. Alexander. 2013. Coastal landscapes and their relationship to human settlement on the Georgia coast. In Life among the tides: Recent archaeology on the Georgia Bight. Anthropological Papers of the American Museum of Natural History, Number 98, ed. V. D. Thompson and D. H. Thomas, 169-190. New York: American Museum of Natural History. doi: 10.5531/sp.anth.0098
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Turich, C., S. Schouten, R. Thunell, R. Varela, Y. Astor, and S. G. Wakeham. 2013. Comparison of TEX86 and temperature proxies in sinking particles in the Cariaco Basin. Deep-Sea Research I 78:115-133. doi: 10.1016/j.dsr.2013.02.008
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2012

Barrett, P. M, J. A. Resing, N. J. Buck, C. S. Buck, W. M. Landing, and C. I. Measures. 2012. The trace element composition of suspended particulate matter in the upper 1000 m of the eastern North Atlantic Ocean: A16N. Marine Chemistry 142-144:41-53. doi: 10.1016/j.marchem.2012.07.006
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Bell, R. J., W. B. Savidge, S. K. Toler, R. H. Byrne, and R. T. Short. 2012. In situ determination of porewater gases by underwater flow-through membrane inlet mass spectrometry. Limnology and Oceanography Methods 10:117-128. doi: 10.4319/10m.2012.10.117
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Buck, C. S., and A. Paytan. 2012. Evaluation of commonly used filter substrates for the measurement of aerosol trace element solubility. Limnology and Oceanography: Methods 10:790-806. doi: 10.4319/lom.2012.10.790
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Calbet, A., R. A. Martínez, S. Isari, S. Zervoudaki, J. C. Nejstgaard, P. Pitta, A. F. Sazhin, D. Sousoni, A. Gomes, S. A. Berger, T. M. Tsagaraki, and R. Ptacnik. 2012. Effects of light availability on mixotrophy and microzooplankton grazing in an oligotrophic plankton food web: Evidences from a mesocosm study in Eastern Mediterranean waters. Journal of Experimental Marine Biology and Ecology 424-425: 66-77. doi: 10.1016/j.jembe.2012.05.005
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Diaz, J., E. D. Ingall, S. D. Snow, C. Benitez-Nelson, M. Tallifert, and J. A. Brandes. 2012. Potential role of inorganic polyphosphate in the cycling of phosphorus within the hypoxic water column of Effingham Inlet, British Columbia. Global Biogeochemical Cycles doi: 10.1029/2011GB004226
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Dittmar, T., C. de E. Rezende, M. Manecki, J. Niggemann, A. R. C. Ovalle, A. Stubbins, and M. C. Bernardes. 2012. Continuous flux of dissolved black carbon from a vanished tropical forest biome. Nature Geoscience 5: 618-622. doi: 10.1038/NGEO1541.
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Han, Q., C. S. Zender, J. K. Moore, C. S. Buck, Y. Chen, A. Johansen, and C. I. Measures. 2012. Global estimates of mineral dust aerosol iron and aluminum solubility that account for particle size using diffusion-controlled and surface-area-controlled approximations. Global Biogeochemical Cycles 26: GB2038. doi: 10.1029/2011GB004186
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Harvey, E. L., and S. Menden-Deuer. 2012. Predator-induced fleeing behaviors in phytoplankton: a new mechanism for harmful algal bloom formation? PLoS ONE 7(9): e46438.
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Jackson, Jr., C. W., C. R. Alexander, and D. W. Bush. 2012. Application of the AMBUR R package for spatio-temporal analysis of shoreline change: Jekyll Island, Georgia, USA. Computers and Geosciences 41: 199-207. doi: 10.1016/j.cageo.2011.08.009
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Koski, M., L. Yebra, J. Dutz, S. H. Jónasdóttir, C. Vidoudez, H. H. Jakobsen, G. Pohnert, and J. C. Nejstgaard. 2012. The effect of egg versus seston quality on hatching success, naupliar metabolism and survival of Calanus finmarchicus in mesocosms dominated by Phaeocystis and diatoms, Marine Biology 159(3): 643-660. doi: 10.1007/s00227-011-1843-z
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Leal, M. C., C. Nunes, S. Engrola, M. T. Dinis, and R. Calado. 2012. Optimization of monoclonal production of the glass anemone Aiptasia pallida (Agassiz in Verrill, 1864). Aquaculture doi: 10.1016/j.aquaculture.2012.03.035
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Leal, M., C. Madeira, C. A. Brandão, J. Puga, and R. Calado. 2012. Bioprospecting of marine invertebrates for new natural products — A chemical and zoogeographical perspective. Molecules 2012, 17: 9842-9854. doi: 10.3390/molecules17089842
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Lee, R. F., M. Köstner, and G. -A. Paffenhöfer. 2012. Ingestion and defecation of dispersed oil droplets by pelagic tunicates. Journal of Plankton Research 34(12): 1058-1063. doi: 10.1093/plankt/fbs065
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Pennings, S. C., M. Alber, C. R. Alexander, M. Booth, A. Burd, W. -J. Cai, C. Craft, C. B. DePratter, D. Di Iorio, C. Hopkinson, S. B. Joye, C. D. Meile, W. S. Moore, B. Silliman, V. Thompson, and J. P. Wares. 2012. South Atlantic tidal wetlands. In Wetland Habitats of North America: Ecology and Conservation Concerns, ed. A. Baldwin, and D. Batzer, pp. 45-61, University of California Press.
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Rush, D., S. G. Wakeham, E. C. Hopmans, S. Schouten, and J. S. Sinninghe Damsté. 2012. Biomarker evidence for anammox in the oxygen minimum zone of the Eastern Tropical North Pacific. Organic Geochemistry 53:80-87. doi: 10.1016/j.orggeochem.2012.02.005
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Spencer, R. G. M., P. J. Hernes, A. K. Aufdenkampe, A. Baker, P. Gulliver, A. Stubbins, G. R. Aiken, R. Y. Dyda, K. D. Butler, V. L. Mwamba, A. M. Mangangu, J. N. Wabakanghanzi, and J. Six. 2012. An initial investigation into the organic matter biogeochemistry of the Congo River. Geochimica et Cosmochimica Acta 84:614-627. doi: 10.1016/j.gca.2012.01.013
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Sebastian P., H. Stibor, S. Berger, and S. Diehl. 2012. Effects of water temperature and mixed layer depth on zooplankton body size. Marine Biology 159(11): 2431-2440. doi: 10.1007/s00227-012-1931-8
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Stubbins, A., E. Hood, P. A. Raymond, G. R. Aiken, R. L. Sleighter, P. J. Hernes, D. Butman, P. G. Hatcher, R. G. Striegl, P. Schuster, H. A. N. Abdulla, A. W. Vermilyea, D. T. Scott, and R. G. M. Spencer. 2012. Anthropogenic aerosols as a source of ancient dissolved organic matter to glaciers. Nature Geoscience 5:198-201. doi: 10.1038/ngeo1403
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Stubbins, A., T. Dittmar, and J. Niggemann. 2012. Photo-lability of deep ocean dissolved black carbon. Biogeosciences 9:1661-1670. doi:10.5194/bg-9-1661-2012
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Stubbins, A.and T. Dittmar. 2012. Low volume quantification of dissolved organic carbon and dissolved nitrogen. Limnology and Oceanography: Methods 10:347-352. doi: 10.4319/lom.2012.10.347
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Wakeham, S. G., C. Turich, F. Schubotz, A. Podlaska, X. N. Li, R. Varela, Y. Astor, J. Sáenz, D. Rush, J. S. Sinninghe Damsté, R. E. Summons, M. I. Scranton, G. T. Taylor, and K. -U. Hinrichs. 2012. Biomarkers, chemistry and microbiology show chemoautotrophy in a multilayer chemocline in the Cariaco Basin. Deep-Sea Research 63:133-156. doi: 10.1016/j.dsr.2012.01.005
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Winder, M., S. A. Berger, A. Lewandowska, N. Aberle, K. Lengfellner, U. Sommer, and S. Diehl. 2012. Spring phenological responses of marine and freshwater plankton to changing temperature and light conditions. Marine Biology 159(11): 2491-2501. doi: 10.1007/s00227-012-1964-z
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Windom, H. L., L. F. Niencheski, D. Wells, and J. Brandes. 2012. The use of oxygen isotopic ratios to identify natural and anthropogenic mercury concentrations in the Lower Brazilian Pantanal. Environmental Earth Sciences 65(2): 547-553. doi: 10.1007/s12665-011-1369-1
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Wood, W. F., J. A. Brandes, B. D. Foy, C. G. Morgan, T. D. Mann, and D. A. DeShazer. 2012. The maple syrup odour of the “candy cap” mushroom, Lactarius fragilis var. rubidusBiochemical Systematics and Ecology 43: 51-53. doi: 10.1016/j.bse.2012.02.027
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2011

Alexander, C. R., A. D. Uhler, and R. F. Lee. 2011. Using sediment cores to assess inputs of organochlorines and polycyclic aromatic hydrocarbons in coastal Georgia estuaries. In Global Contamination Trends of Persistent Organic Chemicals, ed. B. G. Loganathan, and P. K. -S. Lam, 469-479. Boca Raton: CRC Press.
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Cass, C. J., S. G. Wakeham, and K. L. Daly. 2011. Lipid composition of tropical and subtropical copepod species of the genus Rhincalanus (Copepoda: Eucalanidae): A novel fatty acid and alcohol signature. Marine Ecology Progress Series 439:127-138. doi: 10.3354/meps09324
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Chen, H., A. Stubbins, and P. G. Hatcher. 2011. A mini-electrodialysis system for desalting small volume saline samples for Fourier transform ion cyclotron resonance mass spectrometry. Limnology and Oceanography: Methods 9(12): 582-592. doi: 10.4319/lom.2011.9.582
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Chen, X., S. G. Wakeham, and N. S. Fisher. 2011. Influence of iron on fatty acid and sterol composition of marine phytoplankton and copepod consumers. Limnology and Oceanography 56:716-724. doi: 10.4319/lo.2011.56.2.0716
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Gallon, C., M. A. Ranville, C. H. Conway, W. M. Landing, C. S. Buck, P. L. Morton, and A. R. Flegal. 2011. Asian industrial lead inputs to the North Pacific evidenced by lead concentrations and isotopic compositions in surface waters and aerosols. Environmental Science & Technology 45(23): 9874-9882. doi: 10.1021/es2020428
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Harvey, E. L., and S. Menden-Deuer. 2011. Avoidance, movement, and mortality: the interactions between a protistan grazer and Heterosigma akashiwo, a harmful algal bloom species. Limnology & Oceanography 56(1): 371-378. doi:10.4319/lo.2011.56.1.0371
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Ingall, E. D., J. A. Brandes, J. M. Diaz, M. D. de Jonge, D. Paterson, I. McNulty, W. C. Elliott, and P. Northrup. 2011. Phosphorus K-edge XANES spectroscopy of mineral standards. Journal of Synchrotron Radiation 18:189-197. doi: 10.1107/S0909049510045322
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Jónasdóttir, S. H., J. Dutz, M. Koski, L. Yebra, H. H. Jakobsen, C. Vidoudez, G. Pohnert, and J.C. Nejstgaard. 2011. Extensive cross-disciplinary analysis of biological and chemical control of Calanus finmarchicus reproduction during an aldehyde forming diatom bloom in mesocosms. Marine Biology 158:1943-1963. doi: 10.1007/s00227-011-1705-8
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Köster, M., R. Sietmann, A. Meuche, and G. -A. Paffenhöfer. 2011. The ultrastructure of a doliolid and a copepod fecal pellet. Journal of Plankton Research 33(10): 1538-1549. doi: 10.1093/plankt/fbr053
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Paffenhöfer, G. -A., and M. Köster. 2011. From one to many: on the life cycle of Dolioletta gegenbauri Uljanin (Tunicata, Thaliacea). Journal of Plankton Research 33(7): 1139-1145. doi: 10.1093/plankt/fbr001
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Patonai, K., H. El-Shaffey, and G. -A. Paffenhöfer. 2011. Sinking velocities of fecal pellets of doliolids and calanoid copepods. Journal of Plankton Research 33(7): 1146-1150. doi: 10.1093/plankt/fbr011
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Rontani, J. -F., N. Zabeti, and S. G. Wakeham. 2011. Degradation of particulate organic matter in the Equatorial Pacific Ocean: Biotic or abiotic? Limnology and Oceanography 56:333-349. doi: 10.4319/lo.2011.56.1.0333
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Rontani, J. -F., S. G. Wakeham, F. G. Prahl, F. Vaultier, and J. K. Volkman. 2011. Analysis of trace amounts of alkenones in complex environmental samples by (NaBH4 or NaBD4) reduction and silylation. Organic Geochemistry 42:1299-1307. doi: 10.1016/j.orggeochem.2011.09.004
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Saenz, J., R. Summons, T. I. Eglinton, and S. G. Wakeham. 2011. New constraints on the provenance of hopanoids in the marine geologic record: Bacteriohopanepolyols in marine suboxic and anoxic environments.  Organic Geochemistry 42:1351-1322. doi: 10.1016/j.orggeochem.2011.08.016
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Stubbins, A., C. S. Law, G. Uher, and R. C. Upstill-Goddard. 2011. Carbon monoxide apparent quantum yields and photoproduction in the Tyne estuary. Biogeosciences 8:703-713. doi: 10.5194/bg-8-703-2011
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Vidoudez, C., J. C. Nejstgaard, H. H. Jakobsen, and G. Pohnert. 2011. Dynamics of dissolved and particulate polyunsaturated aldehydes in mesocosms inoculated with different densities of the diatom Skeletonema marinoiMarine Drugs 9(3): 345-358. doi: 10.3390/md9030345
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Xue, J., C. Lee, S. Wakeham, and R. A. Armstrong. 2011. Using principal components analysis (PCA) with cluster analysis to study the organic geochemistry of sinking particles in the ocean. Organic Geochemistry 42:356-367. doi: 10.1016/j.orggeochem.2011.01.012
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